PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu038578.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 171aa    MW: 19159.2 Da    PI: 9.9297
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu038578.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF59.93e-19957149
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                 k ien s+r++tf+kRr+g++KKA+ L++ C+ae+ vi +s+ g+++ +
  Oeu038578.1  9 KAIENVSKRHTTFTKRRQGLFKKAKDLCTKCEAEATVITVSKAGNIFAF 57
                 68******************************************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MVRRKVEIKA IENVSKRHTT FTKRRQGLFK KAKDLCTKCE AEATVITVSK AGNIFAFGHP  60
AVDPVVNRYL SYGNGDERVH GGNRMAAMEE EMLSLSKAER KVQTVMGKGR QEWDLAIGDL  120
EINELDEMEM VIRDIKRIAA ARSMEIVAGG GKDQEVKCFG KDSIVPYRRR *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.12e-21M-type_MADS family protein