PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu038745.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 521aa    MW: 59339.7 Da    PI: 4.5089
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu038745.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS163.91.4e-501585203374
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +l+ +  ea ++g++elaq +L+ ++e ++p g+ m+Rla+y+ +  +++ +            +++s   +++   a+k+f++  P+ +f+h+taN+
  Oeu038745.1 158 HLIRAYGEATENGQKELAQVILNSIEEKSNPLGKIMERLAFYLFQSKENQGHY----------LRQES---VKNFSEAYKAFYQGLPYGRFAHFTANS 242
                  566667789999******************************99876666554..........34444...8899999******************** PP

         GRAS 101 aIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                  aIle+v ++  ++Hi+Dfdi++G+QWp++++a++        l++T+++s++++      +e t+++L++ A+e+g++++++    k+++dl  e  r
  Oeu038745.1 243 AILESVPNDaATLHIVDFDIGEGIQWPPIIEAISRT---HKALKLTTIKSADEFsfPCWDVECTKRQLQDHAREFGLKLQIEE---KSVSDLASELTR 334
                  ******9997899********************874...457********9998888999*********************98...677777666666 PP

         GRAS 196 vkp....gEalaVnlvlqlhrlldesvsleserdevLklvksl......sPkvvvvveqeadh...nsesFlerflealeyysalfdsleaklprese 280
                  +k+    +E l+ n++++l ++   ++  +s+ +e+Lk+ k++      s+ +v++   e++    + + +   f e l++y alf+sle+++++ ++
  Oeu038745.1 335 MKKrgqdREWLVFNCMFRLPHMA--RMRRRSHVKEFLKVAKEVltnygaSAGMVTLGYGETEFysrTCSGYSSFFDEILQHYQALFESLEQSFSNLAD 430
                  6666677***************9..77777889********985555546778999766654421366799999************************ PP

         GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaWr 374
                  +r+ +E  + +++ +++   +  e     e+  + ++   e G++  +ls+++  +ak ++++++ + y+ +   ++++++vl Wk+ pLv vS W+
  Oeu038745.1 431 ARTALESLFRAPHMSSLSWFQDWE-----ESI-ECSDLRLETGLEGKSLSQEILVEAKQIVNQIG-NSYKAKingQRENEMVLEWKGTPLVKVSTWT 520
                  ********8888888777777766.....333.345555679***********************.44888777889*******************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    
MQSERILPSW ETLNLKGSNL DQSKFYDPQL DFFMGDDLDF SPSSNSPEES SVISSKSHIL  60
TFSDEYFDLP NMGDEILMTS PMEGLETISS GEIADICGWI NEREYEEIFL TPISMDGEEY  120
SPCFSQESSE KPVVFPLTNE SEILPGVMEI DSESSLHHLI RAYGEATENG QKELAQVILN  180
SIEEKSNPLG KIMERLAFYL FQSKENQGHY LRQESVKNFS EAYKAFYQGL PYGRFAHFTA  240
NSAILESVPN DAATLHIVDF DIGEGIQWPP IIEAISRTHK ALKLTTIKSA DEFSFPCWDV  300
ECTKRQLQDH AREFGLKLQI EEKSVSDLAS ELTRMKKRGQ DREWLVFNCM FRLPHMARMR  360
RRSHVKEFLK VAKEVLTNYG ASAGMVTLGY GETEFYSRTC SGYSSFFDEI LQHYQALFES  420
LEQSFSNLAD ARTALESLFR APHMSSLSWF QDWEESIECS DLRLETGLEG KSLSQEILVE  480
AKQIVNQIGN SYKAKINGQR ENEMVLEWKG TPLVKVSTWT *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.12e-25GRAS family protein