PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu038882.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 222aa    MW: 25846.1 Da    PI: 5.8179
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu038882.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.23.2e-1961114356
                  --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                  k+ +++ eqle Le+ F+k+ +++ +++ +LAk+lgL+ rq+ vWFqNr+a++k
  Oeu038882.1  61 KKKRLSGEQLESLENSFQKEIKLDPDRKMKLAKELGLQPRQIAVWFQNRKARWK 114
                  5567999**********************************************9 PP
2HD-ZIP_I/II113.21.6e-3661151292
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  kk+rls eq+++LE+sF++e kL+p+rK++la+eLglqprq+avWFqnr+AR+k++qlE+ y+ Lk++yd +++e+++L +ev +Lr+ l+
  Oeu038882.1  61 KKKRLSGEQLESLENSFQKEIKLDPDRKMKLAKELGLQPRQIAVWFQNRKARWKSQQLERLYDELKQEYDDVSREKQKLLEEVVTLRSILE 151
                  9*************************************************************************************98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MEWNGNLRVP IVSLPDHSFS FLYNYNYDQF QGLEMKNSMQ TQEEVLPTMK KMNNYGCSQD  60
KKKRLSGEQL ESLENSFQKE IKLDPDRKMK LAKELGLQPR QIAVWFQNRK ARWKSQQLER  120
LYDELKQEYD DVSREKQKLL EEVVTLRSIL EEQVTKKQVC TGYNAEVLVE STSIPTSSDN  180
PRGSSGTHRT VPDESNYVVN VDGYDHQIMP PYWNVQQPSC P*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16190KKKRLSGEQLESLENSFQKEIKLDPDRKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03790.15e-47HD-ZIP family protein