PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu039020.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 200aa    MW: 22682.1 Da    PI: 6.7899
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu039020.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.4e-053153123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C+ C++ F++   L  H+++H
  Oeu039020.1 31 YSCSFCNREFRSAQALGGHMNVH 53
                 99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MNSIRSSWEE EAFAEDSMGP LGGFIWPPRS YSCSFCNREF RSAQALGGHM NVHRRDRAKL  60
QHQQSPDPKN EVLQLENHSL NLPNDNHQYE AYKYGNKTSF SSMFHQENSF DHNYLHVSPA  120
SSSRPKTAPE EHTRKGKPML EYDDEMNSCS SKRPKKNGVP SLQIFQNLCS SDGFTNLQKT  180
SSMDDIDLEL RLGDPPAVK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.11e-24C2H2 family protein