PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu039052.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 204aa MW: 23967.1 Da PI: 5.8535

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu039052.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.3	7.5e-20	52	104	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++++q Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k Oeu039052.1 52 KRKLSEQQMSLLEQSFEDEHKLESERKDKLASELGLDPRQVAVWFQNRRARWK 104 45899***********************************************9 PP
2	HD-ZIP_I/II	119.1	2.3e-38	51	141	2	92
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kr+ls++q++lLE+sFe e+kLe+erK +la+eLgl+prqvavWFqnrRAR+k+k++E++y++Lk+++++ + en+rLe+ev +L+e+l Oeu039052.1 51 RKRKLSEQQMSLLEQSFEDEHKLESERKDKLASELGLDPRQVAVWFQNRRARWKSKKMEEEYSKLKNQHETTVIENCRLENEVLKLKEQLC 141 8**************************************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MNQIDDDQMV LISQYYPAGI YDQLLPEQVE AKPRRRRKKN KGEAGSSGMM RKRKLSEQQM 60 SLLEQSFEDE HKLESERKDK LASELGLDPR QVAVWFQNRR ARWKSKKMEE EYSKLKNQHE 120 TTVIENCRLE NEVLKLKEQL CDTKKEIQKL TECFERLSSN SPTSSFSMEP PFLGEFGMEG 180 LENAFYLPEN NFIHGYEWVN LYA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	34	53	RRRRKKNKGEAGSSGMMRKR
2	34	54	RRRRKKNKGEAGSSGMMRKRK
3	35	54	RRRRKKNKGEAGSSGMMRKR
4	35	55	RRRRKKNKGEAGSSGMMRKRK
5	36	56	RRRRKKNKGEAGSSGMMRKRK
6	37	57	RRRRKKNKGEAGSSGMMRKRK
7	51	80	RKRKLSEQQMSLLEQSFEDEHKLESERKDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18550.1	4e-71	HD-ZIP family protein