PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu039136.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 248aa MW: 27862.7 Da PI: 8.4873

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu039136.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.6	2.4e-06	88	107	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C ksF+r nLk H+ Oeu039136.1 88 FSCHICYKSFNRYNNLKMHM 107 89*****************9 PP
2	zf-C2H2	17.7	1e-05	172	194	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cgk+F k + ++H +++ Oeu039136.1 172 FVCTKCGKPFAVKGDWRTHEKNC 194 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MEDEDCSTIA NNESETVSLH IGLPISSSSG SSGSGLSSSG EITDKDGFNV LSGLPSNSLN 60 KGQYWICLNK GQYWIPTPSQ IISGPTQFSC HICYKSFNRY NNLKMHMWGH GSQYRKGPES 120 LRGTQPTGML RLPCYCCAPE CKHNIDHPTA RPLKDFRILQ THYKRKHGTK SFVCTKCGKP 180 FAVKGDWRTH EKNCGKIWYC ICGSDFKHKR SLKDHIKVFG LGHQTLGIRI DFEEDDENLL 240 ETFHLKV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-106	C2H2 family protein