PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu039230.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 238aa    MW: 26493.1 Da    PI: 7.6718
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu039230.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.93.2e-1267119155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++ h e+E++RR+++++  + Lr+llP  +   ++K s ++   +A +YIk++q
  Oeu039230.1  67 KKVVHREIEKQRRQEMKKLCASLRSLLPLEF--IKGKRSVSDHMHEAANYIKHMQ 119
                  6789*************************65..*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MFPTQQSNEL VFSDPSIFED DKVLEELLAD HVLLGGRATK DTKKRRRESS ASVKENKDVN  60
DNEIKNKKVV HREIEKQRRQ EMKKLCASLR SLLPLEFIKG KRSVSDHMHE AANYIKHMQT  120
SIEELSSRRD KLKSSSNFSA AEAMNASSRI GSTHGIVVNP FRDGVEILIS SSLKPEGFPL  180
SGVLQELLEM GLNAVSCETT KGNEKSIYRI QIEASDLTAG IDLSVLQERL ANVINLA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.13e-31bHLH family protein