PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu039231.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 245aa    MW: 27898.6 Da    PI: 7.5986
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu039231.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.5e-1372124155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  r+ +h   Er+RR+++ + ++ Lr+llP+ +    ++K s ++    Av+YI+++q
  Oeu039231.1  72 RKIMHRDLERQRRQEMANLYASLRSLLPPeN---IKGKRSISDHMHAAVNYIQQMQ 124
                  6789*************************66...********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MYQSQHNNEV IFDQNPLIIF QQDEILEDLL LDHVLMDCSH FANEDAKKRK RKSSTGVKEK  60
NIDDSSNEYK LRKIMHRDLE RQRRQEMANL YASLRSLLPP ENIKGKRSIS DHMHAAVNYI  120
QQMQRKIKEL QIRRDQLKKF SNSGILLSSD NGSSSNSDLP NFEVIVNRGR DGVEILISFV  180
SKDEGFPLSK VFTELLESGL NVVSCVSTKA NERALYRIQS SEANDSSTDL SLLQGRLANV  240
INCL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14752KKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.14e-34bHLH family protein