PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu039272.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ERF
Protein Properties Length: 215aa    MW: 23925.6 Da    PI: 5.9522
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu039272.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.67.5e-1470116454
          AP2   4 kGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                   GVr +k +g++ AeIrd ++    +kr++lg++ t eeA + + a ++++e
  Oeu039272.1  70 IGVRKRK-SGKYSAEIRDpFK----KKRVWLGTYNTVEEASEVYLAKKREFE 116
                  6***999.7*********662....5********************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MKRKVRVSYS DPDATDSSSN EGGDGPEKSK RLVHEILGKN LDEKGSGKIR PRIKKFNSRV  60
LDQNGMGKLI GVRKRKSGKY SAEIRDPFKK KRVWLGTYNT VEEASEVYLA KKREFEEKQS  120
AGWGIDCGPC DNSSEDSSPS VNEFDTLDSP KEVSSTEREV FEENKAASNE GQNFSLPDPS  180
GKFGMLFGVQ IIDNHGFLLG EFSKLDDFSI RESE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17392RKRKSGKYSAEIRDPFKKKR
27493RKRKSGKYSAEIRDPFKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.14e-20ERF family protein