PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu039337.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 88aa    MW: 9964.2 Da    PI: 4.1766
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu039337.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26042.32.1e-1314061100
       DUF260  61 lvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                  +vyeA+ar+rdPvyG++g i +lq+q+++l+aela+ ++e
  Oeu039337.1   1 MVYEANARLRDPVYGCAGAICQLQKQISELQAELAKSHAE 40 
                  69*********************************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MVYEANARLR DPVYGCAGAI CQLQKQISEL QAELAKSHAE ILNMQCQNAN LRQFIYQENC  60
PQEQPNENSP FFFDESILGA AWEPLWT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.19e-27LBD family protein