PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu039510.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 63aa    MW: 6905.06 Da    PI: 11.0568
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu039510.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.72.7e-271059251
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 ri++++ rqvtfskRrng+lKKA+EL +LCdaev v+ifsst kly+++s
  Oeu039510.1 10 RIDDSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTAKLYDFAS 59
                 8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 63 aa     Download sequence    
MGRGKIVIRR IDDSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVVIFSS TAKLYDFAST  60
RS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.16e-32MIKC_MADS family protein