PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu039620.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

E2F/DP

Protein Properties

Length: 478aa MW: 52014.2 Da PI: 4.7169

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu039620.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	82.6	3.2e-26	157	222	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL llt+kf++l++ +e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg Oeu039620.1 157 RYDSSLSLLTKKFINLIKYAEDGILDLNKAADTL---QV--QKRRIYDITNVLEGIGLIEKKLKNRIHWKG 222 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MTGQEAPTRE AVPTPPAAAG NGQIIYQQQT PPTAIRRHLP FESMKPPFAP HDDYHHFCTP 60 GRAPASSSSH PSDAVVVKSP ALKRKKGFEN NKFESSEKTA SPAYNDAASG PFLTPISGKG 120 GKIAGRSKVA KNNISSSPTP ASSVDTPLTL TPAGSCRYDS SLSLLTKKFI NLIKYAEDGI 180 LDLNKAADTL QVQKRRIYDI TNVLEGIGLI EKKLKNRIHW KGFDPSKPGQ VDSDSTLLQA 240 EIENLSVEER GLDEQTREMQ EKLRDLSEDE NNQRWLFVTE DDIKGLPCFK DETLIAIKAP 300 HGTTLEVPDP DEAVDYPQRR YRIILRSTMG PIDVYLVSQF EEKFEEINGG EPSTSLPLGS 360 SDNPATQGAL LASSGKEIEA QAQDDHRINS DFGALQECAG GMTKIVPSNI DNDADYWLLS 420 DADVSITDMW KTDSVVGWNG VDMLDDEFGM ASIVTPRPQT PPSGVADVPT VVSLPPR*

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MTGQEAPTRE AVPTPPAAAG NGQIIYQQQT PPTAIRRHLP FESMKPPFAP HDDYHHFCTP  60
GRAPASSSSH PSDAVVVKSP ALKRKKGFEN NKFESSEKTA SPAYNDAASG PFLTPISGKG  120
GKIAGRSKVA KNNISSSPTP ASSVDTPLTL TPAGSCRYDS SLSLLTKKFI NLIKYAEDGI  180
LDLNKAADTL QVQKRRIYDI TNVLEGIGLI EKKLKNRIHW KGFDPSKPGQ VDSDSTLLQA  240
EIENLSVEER GLDEQTREMQ EKLRDLSEDE NNQRWLFVTE DDIKGLPCFK DETLIAIKAP  300
HGTTLEVPDP DEAVDYPQRR YRIILRSTMG PIDVYLVSQF EEKFEEINGG EPSTSLPLGS  360
SDNPATQGAL LASSGKEIEA QAQDDHRINS DFGALQECAG GMTKIVPSNI DNDADYWLLS  420
DADVSITDMW KTDSVVGWNG VDMLDDEFGM ASIVTPRPQT PPSGVADVPT VVSLPPR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-150	E2F/DP family protein