PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu039820.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 154aa    MW: 17791.8 Da    PI: 4.8972
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu039820.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.33e-1626104283
     trihelix   2 WtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 
                  W+++e+  L ++r++meerl + g +++  Wee+++km+  g  rs  +Ckekw ++n++  ++++ ++++     + c+y++
  Oeu039820.1  26 WPDREITRLFQLRTSMEERLLQgGVSEEVIWEEIAIKMACFGHDRSGLTCKEKWVSVNNYLLECNNKRREN----PKGCSYYQ 104
                  *******************99835799**************************************999984....44588876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MAAAGKNPND DRSETITNTV KRDNIWPDRE ITRLFQLRTS MEERLLQGGV SEEVIWEEIA  60
IKMACFGHDR SGLTCKEKWV SVNNYLLECN NKRRENPKGC SYYQNNIESI CNEREADNTS  120
RSNDNGMNDF CFRYFMGDAD NIWENYALKL NKG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.15e-21Trihelix family protein