PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu039842.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 491aa MW: 53924.5 Da PI: 8.0977

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu039842.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.4	4.5e-19	89	175	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L+ea++++ +l+rg+l++ +Weev++ + r + ++s +qCk+k +nl+kryk ++++ +++ s s++p+f+q+e Oeu039842.1 89 EWSDTAIACLLEAYTDKFVQLNRGNLRGRDWEEVAATVsdRCDKQSKSVEQCKNKVDNLKKRYKLERHRLSNG-GLSASHWPWFQQME 175 5***********************************88888999*********************99.788889*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MASCDDDFSL LDDHQNPDST QPSATIQTPP FSVNPYDQDS DPFDSEPDPS SRSGKRATER 60 DEISNGVSKR TRLHSASSSA GDYRKDREEW SDTAIACLLE AYTDKFVQLN RGNLRGRDWE 120 EVAATVSDRC DKQSKSVEQC KNKVDNLKKR YKLERHRLSN GGLSASHWPW FQQMEQIVGN 180 SIAAKAAADE EKNSVSGGSS ICTRQPKRHA TTTATATATA SPGGQIMTMK SKPSANLRWR 240 RVVFKISGAA LAGNASNNID PKLDQFSSTS SNLHYYCAYS YKYIVNLKVI YKVGKLINRK 300 GRMMATVMNS ILLQSALEKL GVQTRVQSAF SMPEVAEPYS RQRAIRHLEK GRVVIFGGIG 360 AGTGNPLFST DTAAALRASE IHADVVMKGT NMDGVFVCDP RNNNIAAEHI SFRDLASRGA 420 SPMDMMAMTF CEENGIPVVI FNLHEPGNIS RALCGEQSGV QIDSFSMKLS AQYGEMEKVP 480 NFIPNEWGNC *

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MASCDDDFSL LDDHQNPDST QPSATIQTPP FSVNPYDQDS DPFDSEPDPS SRSGKRATER  60
DEISNGVSKR TRLHSASSSA GDYRKDREEW SDTAIACLLE AYTDKFVQLN RGNLRGRDWE  120
EVAATVSDRC DKQSKSVEQC KNKVDNLKKR YKLERHRLSN GGLSASHWPW FQQMEQIVGN  180
SIAAKAAADE EKNSVSGGSS ICTRQPKRHA TTTATATATA SPGGQIMTMK SKPSANLRWR  240
RVVFKISGAA LAGNASNNID PKLDQFSSTS SNLHYYCAYS YKYIVNLKVI YKVGKLINRK  300
GRMMATVMNS ILLQSALEKL GVQTRVQSAF SMPEVAEPYS RQRAIRHLEK GRVVIFGGIG  360
AGTGNPLFST DTAAALRASE IHADVVMKGT NMDGVFVCDP RNNNIAAEHI SFRDLASRGA  420
SPMDMMAMTF CEENGIPVVI FNLHEPGNIS RALCGEQSGV QIDSFSMKLS AQYGEMEKVP  480
NFIPNEWGNC *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	1e-157	Trihelix family protein