PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu039844.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 224aa MW: 25859 Da PI: 6.9233

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu039844.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63	4.4e-20	64	117	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++t++qle Le+ F+++ +++ +++ +LAk lgL+ rq+ vWFqNrRa++k Oeu039844.1 64 KKKRLTNDQLESLENSFQEEIKLDPDRKMKLAKDLGLQPRQIAVWFQNRRARWK 117 56679************************************************9 PP
2	HD-ZIP_I/II	118.9	2.8e-38	64	155	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kk+rl+++q+++LE+sF+ee kL+p+rK++la++Lglqprq+avWFqnrRAR+k+kqlE+ y++Lk++y+a+++e+++L++ev +Lr+ lke Oeu039844.1 64 KKKRLTNDQLESLENSFQEEIKLDPDRKMKLAKDLGLQPRQIAVWFQNRRARWKAKQLERLYDSLKQEYNAVSREKQQLQEEVLALRAILKE 155 9**************************************************************************************88875 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MDWNGNPRVP SVCRPDGSSF SLLCNYNYDH FPGLEMRQLM QTQHAYLPTM DKNNNINNYG 60 NQDKKKRLTN DQLESLENSF QEEIKLDPDR KMKLAKDLGL QPRQIAVWFQ NRRARWKAKQ 120 LERLYDSLKQ EYNAVSREKQ QLQEEVLALR AILKEQLTKN QASTGYTEVS GDETVESTSI 180 PSSDKPRGGT SIHHQITECN YVLNMEDYNP MMPPYWAAPP SCP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	64	93	KKKRLTNDQLESLENSFQEEIKLDPDRKMK
2	112	120	RRARWKAKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	1e-56	HD-ZIP family protein