PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu040020.3
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 250aa    MW: 28025.2 Da    PI: 5.9795
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu040020.3genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.47.3e-10144191455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR+ri +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Oeu040020.3 144 SHSLAERARRERISERMKILQDLVPGC----NKVIGKALVLDEIINYVQSLQ 191
                  8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MDPQGVMMNE GGRLYNLAEM WPGFQINANE TRSDNLPAIN PGLDSNPMVM EKRSDHSPSQ  60
KSRKQRDEDT EGVSTSNSNG YNHASMNRSD NKRQKVMASN ENLETETDGD GNSHKVAEQP  120
AKLVEPPKQD YIHVRARRGE ATDSHSLAER ARRERISERM KILQDLVPGC NKVIGKALVL  180
DEIINYVQSL QRQVEFLSMK LEAVNARVNP ISQQPFDNPG GVFDSQAARK YDINTTPEWF  240
HMQIGGAFE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-67bHLH family protein