PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu040084.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 241aa    MW: 27299.5 Da    PI: 4.9726
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu040084.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA22.92.9e-071772033158
    CBFB_NFYA  31 deksrkpylheSRhkhAlrRpRgsgGrF 58 
                  d+++  pyl eSR+ hA+rR+R +gG+F
  Oeu040084.1 177 DADEEPPYLDESRQLHAVRRAR-EGGQF 203
                  567788****************.99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MAIRSESTQL HYDFRSSYPL RSPIKINDQL TLVATGLLKT DIFELETVKA CETKMVLGMR  60
AVMFVHQVFV SSIEKWKYKT YDNSEAYEQQ KYSEPQIQSN ATSHSGTAFP NMNYAMPAQL  120
SAENAVAQTP YSYSDPYYRS IFAPYDAQPY PAQPYPAQPM LFLLMGIHQV VVPLPLDADE  180
EPPYLDESRQ LHAVRRAREG GQFKRKSENQ QQEYESGEES QANLNLNSDK KDPTSSENGS  240
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.21e-10NF-YA family protein