PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu040292.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 226aa    MW: 26416.7 Da    PI: 8.3185
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu040292.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.98.3e-17855148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed +lv +v+++G ++W+ Ia+  g++Rt+k+c++rw +yl
      Oeu040292.1  8 KGPWTEQEDAQLVLYVNLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYL 55
                     79********************************************97 PP
2Myb_DNA-binding53.84.6e-1761106148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+ E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++
      Oeu040292.1  61 RGKMTPHEERLVLELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 106
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MVQEETRKGP WTEQEDAQLV LYVNLFGDRR WDFIAKVSGL KRTGKSCRLR WVNYLHPDLK  60
RGKMTPHEER LVLELHSKWG NRWSRIARKL PGRTDNEIKN YWRTHMRKKA QEKKKALSPS  120
SSSSSFSSNS PTIEFTSVTK NNECSFYDTG GRKNDFEVDM DEIWKDIEVS EGNCNILCQT  180
IVSPTWDFFQ DSSLWPIDKE EQSKMVLPVS DHFNSFTFYN QEMTG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.36e-77MYB family protein