PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu040355.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

WOX

Protein Properties

Length: 117aa MW: 13632.6 Da PI: 9.6178

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu040355.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.6	5e-09	3	65	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC.....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl.....gLterqVkvWFqNrRakekk 57 r++R+ t+++++ L F n++p+ +e ++ + l ++ ++V WF+NrR e+k Oeu040355.1 3 RQERWITTSTEVDFLRCIFDGgNKNPNNAETLHIVSTLsphnpIISAKNVGDWFKNRRSCERK 65 679***************99***************999************98886 PP
2	Wus_type_Homeobox	44.7	3.2e-15	4	67	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGk.iedkNVfyWFQNrkaRerqkq 65 ++RW t++ + L+ +++ G ++Pn++e+ +i ++L+ + i+ kNV WF+Nr++ er+++ Oeu040355.1 4 QERWITTSTEVDFLRCIFDGGNKNPNNAETLHIVSTLSPHNPiISAKNVGDWFKNRRSCERKRK 67 68************************************8725789************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 117 aa Download sequence
MGRQERWITT STEVDFLRCI FDGGNKNPNN AETLHIVSTL SPHNPIISAK NVGDWFKNRR 60 SCERKRKQTC IENPQLKNLM HEVQPHSTLH YDRRLRTFGL TGLYSAYVFF LCLYLF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20700.1	2e-11	WOX family protein