PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu040363.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 331aa    MW: 36056.8 Da    PI: 5.3772
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu040363.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.99.9e-051972351255
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  R +++ +++  L +l+ +      +K + a++L++A+ YI+ Lq
  Oeu040363.1 197 RKEKLGDRITALHQLVSPF-----GKTDTASVLTEAIGYIRFLQ 235
                  6678889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MMARNPNWWS VNGMHPQSHQ LSSSSPFLYV SSSSSSAATD SSTANPSQEF PVRSWSQLLL  60
SGLAGTGEEE RFGGSLFQQQ KKVENWEDHV LNPSLRDPVV DVKQEVAQTS QLYGHVDEEF  120
QVSRSSCWPQ IIPVSSPTSC ITSSSNNILN FSGAKVDHDR KTQLPDHSSE CNSTSTGGVS  180
KKPKVQQSST QPALKVRKEK LGDRITALHQ LVSPFGKTDT ASVLTEAIGY IRFLQGQIEA  240
LSSPYMRNAT RSMGHQQSVQ ERDCLFPEES SQFLNDVGME GKGASEENSE DEEKDLRSKG  300
LCLVPVSCTQ HVGNDINGAD YWAPALGGGF *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.15e-67bHLH family protein