PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu040381.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 131aa    MW: 14965.2 Da    PI: 6.7701
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu040381.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.21.1e-061091241126
                  GTS--TTTTT-SS-SS CS
      zf-CCCH  11 rtGtCkyGdrCkFaHg 26 
                  + G+C++ ++C+FaH+
  Oeu040381.1 109 EIGQCPFRETCHFAHD 124
                  57*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MSFPDPAQQP PLSPFLPLPF SDGDVDRFWP TPPMNGVVSQ FAHPPLFKRP MNFEAPFAQM  60
KFLDTDISRQ KRESVVESIG TTWPGLINKS DYAQPDYAFR KMKLGCIWEI GQCPFRETCH  120
FAHDRLYLIS *