PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu040441.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 261aa MW: 28255 Da PI: 6.9906

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu040441.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00049	99	121	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++sF++ L H +H Oeu040441.1 99 YECKTCNRSFPSFQALGGHKASH 121 99**********99998888877 PP
2	zf-C2H2	13.9	0.00016	166	188	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H Oeu040441.1 166 HECSICGSEFSSGQALGGHMRRH 188 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MEILEEFLGS NDHSIVKGKR TKRQRPSSST LSSSGATVPT SGEGGGGGGY YSLVTSPTTS 60 TSTNIEEDED MANCLILLAQ SVVSLPKNST KTKDRIYSYE CKTCNRSFPS FQALGGHKAS 120 HKKPKQLETD RKETPVDAPS GDHEEEEGWQ SHKSFHGYTH DKPKIHECSI CGSEFSSGQA 180 LGGHMRRHRN PNSTRVNQSS SRDSEKTRNI LALDLNLPAP AEDDHGPGSE SGSGPETKFR 240 FSSNHQGLVF SAVALVDCHY *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	2e-53	C2H2 family protein