PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu040698.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 260aa MW: 29137.1 Da PI: 9.1605

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu040698.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.8	1.9e-18	93	147	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ +++ L+k+lgL rqV vWFqNrRa+ k Oeu040698.1 93 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALSKRLGLRPRQVEVWFQNRRARTK 147 788899***********************************************98 PP
2	HD-ZIP_I/II	126.9	8.9e-41	93	182	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LEesF+e+++L+p++K +l+++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+e+n+rL+kev+eLr +l Oeu040698.1 93 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALSKRLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEQNRRLQKEVQELR-AL 182 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MSPSSNTSLQ LNLMPSWPSS DRETRTFLKG IDVNRLPKAA DLEEEAGVSS PNSTISSVSG 60 KRSEREPTGS DDPELERDCS RGISDEEDGD GSRKKLRLSK DQSAILEESF KEHNTLNPKQ 120 KLALSKRLGL RPRQVEVWFQ NRRARTKLKQ TEVDCEFLKR CCENLTEQNR RLQKEVQELR 180 ALKLSPQMYM QMTPPTTLTM CPSCERVAVP PTPSSTAKLV TSVEPLPCRV GPAQSRPITF 240 NPWAAAVPRR PFDALSTRQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	98	SRKKLRL
2	142	150	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	1e-97	HD-ZIP family protein