PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu040806.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 390aa MW: 42670.4 Da PI: 8.328

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu040806.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.1	1.8e-24	148	191	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e Oeu040806.1 148 DREPGRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVE 191 679**************************************987 PP
2	QLQ	44	6.9e-16	75	109	1	35
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 s+F+ aQ+q+L+ Q+ ++K+++a++ vP+eLl ++ Oeu040806.1 75 SYFSLAQWQELELQAVIFKHMIAGAAVPSELLHHV 109 79*****************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MDFNLKQWKD QQHELEEEER QQTSSTKLPR LLLNSHPQQP PGPGTAVSLL VPNPTGIYSS 60 DSTTPSANKP PWMGSYFSLA QWQELELQAV IFKHMIAGAA VPSELLHHVN KSLINSSSPP 120 YYQSHHHYYS HYQPGLLQSG YWGKWAMDRE PGRCRRTDGK KWRCSRDVVA GQKYCERHVH 180 RGRNRSRKPV EIPTSTTTPY SGKAGSNGCL EVLKTTNAVA RAATGGGGTV PFSLSGPSPS 240 MDLLHFNQRP SESIIETKGP FEAQDNVEPG GRTLRRFFDD WPRSLQETDN ATSSAASATN 300 LSISMETGNP SSDFSLKLST GYDGDDSGPQ VINGPRDRLQ LNWAAPWGTN QVAPMGGPLA 360 EALRSSTSNS SPTSVLHQLP PRGSALVPE*

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MDFNLKQWKD QQHELEEEER QQTSSTKLPR LLLNSHPQQP PGPGTAVSLL VPNPTGIYSS  60
DSTTPSANKP PWMGSYFSLA QWQELELQAV IFKHMIAGAA VPSELLHHVN KSLINSSSPP  120
YYQSHHHYYS HYQPGLLQSG YWGKWAMDRE PGRCRRTDGK KWRCSRDVVA GQKYCERHVH  180
RGRNRSRKPV EIPTSTTTPY SGKAGSNGCL EVLKTTNAVA RAATGGGGTV PFSLSGPSPS  240
MDLLHFNQRP SESIIETKGP FEAQDNVEPG GRTLRRFFDD WPRSLQETDN ATSSAASATN  300
LSISMETGNP SSDFSLKLST GYDGDDSGPQ VINGPRDRLQ LNWAAPWGTN QVAPMGGPLA  360
EALRSSTSNS SPTSVLHQLP PRGSALVPE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	3e-58	GRF family protein