PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu041131.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family FAR1
Protein Properties Length: 138aa    MW: 15926.1 Da    PI: 9.6032
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu041131.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.81.3e-1635123283
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 
                  fYn+YA+e+ Fs r  +skk+  ++e+ +++fvC+keg+++++ +k      +++ +r+    r+gCkakl++ + k + +w v+++++
  Oeu041131.1  35 FYNSYAREARFSARLINSKKRPGTNEVFSKQFVCYKEGETDNTYQKkfkhlvKRSGERQGGIIRVGCKAKLTIIRPKsSVNWIVSNFVE 123
                  *********************9******************999888899998888999999***********988887999****9974 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MEDDTSIQTF TPQVAEERKP KIGQEFETIE EAYAFYNSYA REARFSARLI NSKKRPGTNE  60
VFSKQFVCYK EGETDNTYQK KFKHLVKRSG ERQGGIIRVG CKAKLTIIRP KSSVNWIVSN  120
FVELIIMHSQ ALQEFTY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-14FAR1 family protein