PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu041383.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 268aa    MW: 30434.6 Da    PI: 9.1448
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu041383.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.32.7e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+  Ed ll+++++q+G g+W++ +++ g+ R++k+c++rw +yl
      Oeu041383.1 14 KGPWSSKEDTLLKNYIQQHGEGQWRSLPHKAGLLRCGKSCRLRWMNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding52.31.3e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ T+eE++++ +++ +lG++ W++Ia +++ gRt++++k++w++ 
      Oeu041383.1  67 RGNITPEEEDIITRLHSLLGNR-WSLIAGRLP-GRTDNEIKNHWNTC 111
                      7999******************.*********.***********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MGRSPCCSKV GLQKGPWSSK EDTLLKNYIQ QHGEGQWRSL PHKAGLLRCG KSCRLRWMNY  60
LRPGIKRGNI TPEEEDIITR LHSLLGNRWS LIAGRLPGRT DNEIKNHWNT CMLKKLKNSG  120
IQPKIHKLSM KCLKEKTKSI VPETSITRNF TKKKINDDGN AKNIESNETK TLHIPKPIRV  180
SSTFSRSNSL DSVLSAASSS DDSGVDEQKL NLLSLFELDR ANYGGLDQVW EEDQDFLSTY  240
DYPLHYSDSS STAEMLEKMY DEYLQLL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.15e-63MYB family protein