PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu041404.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 139aa    MW: 16177.1 Da    PI: 10.4805
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu041404.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF57.51.7e-181050242
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                 +i n+  r+ tf kR++g++KK +ELS+LC+++++ ii+s+
  Oeu041404.1 10 FITNDLARKATFKKRKKGLMKKVSELSTLCGIDICAIIYSP 50
                 899*************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MTRKKVKIAF ITNDLARKAT FKKRKKGLMK KVSELSTLCG IDICAIIYSP YESQPEVWPD  60
NRGIHRVLAQ FKRMLEMEQS KKMVNQESFI RQRIAKASEQ LKKQHKENRE KEITRIMYQC  120
LTGEGLQNLM MLDLNDLG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKIAFITNDLARKATFKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-52M-type_MADS family protein