PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu041439.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YB
Protein Properties Length: 193aa    MW: 20753 Da    PI: 6.0255
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu041439.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB178.94.7e-5621116297
        NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                  +eqdrflPianvsrimkk+lP+nakiskdaketvqecvsefisf+t+easdkcqrekrkt+ngddllwa++tlGfedyveplk+yl+++ ++egek
  Oeu041439.1  21 KEQDRFLPIANVSRIMKKALPTNAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTMNGDDLLWAMTTLGFEDYVEPLKIYLQRFHDMEGEK 116
                  79********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MADSDNESGG HHNSQNESSL KEQDRFLPIA NVSRIMKKAL PTNAKISKDA KETVQECVSE  60
FISFITGEAS DKCQREKRKT MNGDDLLWAM TTLGFEDYVE PLKIYLQRFH DMEGEKAAMS  120
GKGGEKESGG NGSVVNMENS GVGYYDMIGR QGHVYGSSAY NRTAGSSVLG LEKVGSGHQT  180
GSGPSSATAR PM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.19e-72NF-YB family protein