PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu041488.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 320aa    MW: 35621.6 Da    PI: 6.3898
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu041488.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.83.7e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l+++++ +G+g +W + +++ g++R++k+c++rw++yl
      Oeu041488.1 14 KGPWSPEEDAKLKNYIESHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62
                     79*********************************************97 PP
2Myb_DNA-binding40.94.7e-1369111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g ++ +Ed ++  +++  G++ W+ Ia++++ gRt++++k++w++
      Oeu041488.1  69 GEFSDDEDRIICALFTSIGSR-WSIIAAHLP-GRTDNDIKNYWNT 111
                      789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MGRSPCCDKA NVKKGPWSPE EDAKLKNYIE SHGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPNIKHGE FSDDEDRIIC ALFTSIGSRW SIIAAHLPGR TDNDIKNYWN TKLKKKLMEM  120
APFAHHKRSY HGAICPTTAN SFLQNSSAYH STNNNYYTTP PARVFTGGFE FMSNIPSNIL  180
ENTNSFTTCS SNSSTLTAFQ PQEGLGAGPA QNYQVKDNYN NLLIFGNEAS CSSSDGSGID  240
EDLGLLNYFG SGVDENQKFT LPANGYADDQ NKVTNGCFTE NPLDYSIEEI KQLISTNNIC  300
NNLNYFVDEI KTEEQVLYY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.15e-76MYB family protein