PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu041553.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 127aa    MW: 15006.5 Da    PI: 10.2929
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu041553.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.61.2e-312372150
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                 k+ien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++g+lyey+
  Oeu041553.1 23 KKIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIIFSNRGRLYEYA 72
                 78***********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MEFPNQESGS SSRKNGRGKI EIKKIENTTN RQVTFCKRRN GLLKKAYELS VLCDAEVALI  60
IFSNRGRLYE YANNRLRFHC FLFKIHFTLF NALIFQFQVP FYLIYLKFCG KLYNFSFFPT  120
VLHLHF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58780.22e-34MIKC_MADS family protein