PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu041637.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 430aa MW: 48454.7 Da PI: 8.8359

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu041637.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.2	3.4e-09	217	264	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + +k Ka +L + ++Y++sLq Oeu041637.1 217 SHSLAERVRREKISERMKYLQGLVPGC----NKITGKAGMLDEIINYVQSLQ 264 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MDVLERQWMN MKWQKSATHL NEDYRLSMFS IPSIQDQQFQ GLVESDQGIV ELVAQAKKPD 60 PVMENGRNNF CRAENSLNYA SCVYWNGSEF EMNYAIPTTA SCPPEVAVAN KVKEVALPEK 120 LGSAARRESF KKRKSYKARE LKVVAEEQNR EKKAKGRVEE EDSKITKQNS NSKRTTTTSN 180 NNKETSADNS KGNSKLSEIP KPDYIHVRAR RGQATDSHSL AERVRREKIS ERMKYLQGLV 240 PGCNKITGKA GMLDEIINYV QSLQRQIEFL SMKLAAINPS LAFDIENFMV EEMFLASTSS 300 IPTAGVSFDV INPSHIQFNS LQQGVSCYGL ETDVNPPDIM LRRTISSPVL MPEILLESSY 360 LNASISTFSS SGTNNSYKQF KIQQIQHSTW DPEFQNLYGM EFHQGKSTSF NTKPLTSVQN 420 KHVLSNVKT*

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MDVLERQWMN MKWQKSATHL NEDYRLSMFS IPSIQDQQFQ GLVESDQGIV ELVAQAKKPD  60
PVMENGRNNF CRAENSLNYA SCVYWNGSEF EMNYAIPTTA SCPPEVAVAN KVKEVALPEK  120
LGSAARRESF KKRKSYKARE LKVVAEEQNR EKKAKGRVEE EDSKITKQNS NSKRTTTTSN  180
NNKETSADNS KGNSKLSEIP KPDYIHVRAR RGQATDSHSL AERVRREKIS ERMKYLQGLV  240
PGCNKITGKA GMLDEIINYV QSLQRQIEFL SMKLAAINPS LAFDIENFMV EEMFLASTSS  300
IPTAGVSFDV INPSHIQFNS LQQGVSCYGL ETDVNPPDIM LRRTISSPVL MPEILLESSY  360
LNASISTFSS SGTNNSYKQF KIQQIQHSTW DPEFQNLYGM EFHQGKSTSF NTKPLTSVQN  420
KHVLSNVKT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	5e-51	bHLH family protein