PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu041638.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 93aa    MW: 10468.7 Da    PI: 9.1083
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu041638.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.44.3e-10756147
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     + +WT    +l+ +a +q+  +   +W  Iar +g g+t +++k ++  +
      Oeu041638.1  7 KSSWTSHQNKLFEKALAQFDRDtpdRWQNIARAVGGGKTVEEVKKHYEVL 56
                     578*****************99*************************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MASSSLKSSW TSHQNKLFEK ALAQFDRDTP DRWQNIARAV GGGKTVEEVK KHYEVLLEDL  60
QRIESGCVPI PNYMKNGSNG SADQERRLLK YN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.12e-32MYB_related family protein