PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu041659.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

RAV

Protein Properties

Length: 384aa MW: 44254.1 Da PI: 6.0178

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu041659.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	29.9	1.4e-09	33	80	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 +++kGV ++g W A+I+ + +r++lg+f ++ +Aa a++ a+ kl+ Oeu041659.2 33 CKFKGVV-PQQNGHWGAQIYA------NhQRIWLGTFKSEIDAAMAYDSAAIKLR 80 799*6.666899999......44******99**********98 PP
2	B3	84.4	1e-26	154	250	1	87
EEEE-..-HHHHTT-EE--HHH.HTT............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+ltpsdv+k++rlv+pkk+a ++ g +++l ++d++ r W+++++y+k+s++yv+t+GW++Fv++++L+++D++ F++ + Oeu041659.2 154 FQKELTPSDVGKLNRLVIPKKYAVKYfqnvtteddvenG--RVDEVQLEFYDRQMRLWKFRYCYWKSSQSYVFTRGWNRFVREKELRANDIIAFYMYE 249 99***********************999988777432..347889*********************************************9543 PP S CS B3 87 r 87 + Oeu041659.2 250 S 250 2 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MEEEILRMIS PAKVSMNEES SNSNCGIHIF HACKFKGVVP QQNGHWGAQI YANHQRIWLG 60 TFKSEIDAAM AYDSAAIKLR DGETHRNFPW TRLSIQEPKF QSHFSTEAIL NMIRDGSYPS 120 KFAEFLRSQK NEIEIGLNLS SLHGDGEFSC RLLFQKELTP SDVGKLNRLV IPKKYAVKYF 180 QNVTTEDDVE NGRVDEVQLE FYDRQMRLWK FRYCYWKSSQ SYVFTRGWNR FVREKELRAN 240 DIIAFYMYES RDRHQVGQTF CVIDVANKGD SRNGLTAAGM TDLRLDSGTN AIYELNKEVV 300 EEFEDQMEFV GIDSSPSSTE TKSIQYCGVC GTMVWSIIAD WIDLLSHCPE YLTLSFRFIN 360 VTPMTIGHVT FWLLLKDAPF AWA*

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MEEEILRMIS PAKVSMNEES SNSNCGIHIF HACKFKGVVP QQNGHWGAQI YANHQRIWLG  60
TFKSEIDAAM AYDSAAIKLR DGETHRNFPW TRLSIQEPKF QSHFSTEAIL NMIRDGSYPS  120
KFAEFLRSQK NEIEIGLNLS SLHGDGEFSC RLLFQKELTP SDVGKLNRLV IPKKYAVKYF  180
QNVTTEDDVE NGRVDEVQLE FYDRQMRLWK FRYCYWKSSQ SYVFTRGWNR FVREKELRAN  240
DIIAFYMYES RDRHQVGQTF CVIDVANKGD SRNGLTAAGM TDLRLDSGTN AIYELNKEVV  300
EEFEDQMEFV GIDSSPSSTE TKSIQYCGVC GTMVWSIIAD WIDLLSHCPE YLTLSFRFIN  360
VTPMTIGHVT FWLLLKDAPF AWA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51120.1	4e-95	RAV family protein