PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu041708.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HSF
Protein Properties Length: 125aa    MW: 13905.5 Da    PI: 6.5058
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu041708.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind83.62.8e-2657115260
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 
                   Fl+k++e++ed+++++++sw++ g+sfvv+d+++f+++vLp+yFkh+nf+SFvRQLn+Y
   Oeu041708.1  57 FLTKTFEMVEDSTIDNIVSWNRGGHSFVVWDPHSFSTSVLPRYFKHNNFSSFVRQLNTY 115
                   9*********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MNPIYPVKEE YPGGGSSSST AWQSRNQSDG VAPPPPPPPP PPPQPMEGLH DMGPPPFLTK  60
TFEMVEDSTI DNIVSWNRGG HSFVVWDPHS FSTSVLPRYF KHNNFSSFVR QLNTYVSTYF  120
CSYK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51910.13e-37HSF family protein