PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu041768.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 306aa    MW: 34375.7 Da    PI: 6.3298
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu041768.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix476.6e-1520110186
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  +Wt++ + +L++a  ++  +l+rg+l++++W+ev++++     + ++ +r+ +qCk++++ l+k+ k +k+   + + + +s++p+f++l+
  Oeu041768.1  20 CWTEEATSTLVDAWGRRYLELNRGNLRQKDWQEVADAVnarhgHTKKTHRTDVQCKNRIDTLKKKLKIEKAKIAESNGTLTSSWPFFSRLD 110
                  8**************************************999888999**********************9999988888899*****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MGDLTESSTP ARQLPFREDC WTEEATSTLV DAWGRRYLEL NRGNLRQKDW QEVADAVNAR  60
HGHTKKTHRT DVQCKNRIDT LKKKLKIEKA KIAESNGTLT SSWPFFSRLD VLIGSNFNKQ  120
QQKFMPSPIP LVSQSTSTLS LPSPPMAVPL PFRKFPSAML PTAVLPQKRP YSSPSPPPPT  180
VDESYFRRNY SAMAAAAAAA EDAPDAEDEG DSGGEEIEVS DERGAEEEGG DEGMRRLAKA  240
IERFGGIYER VESMKQRQMV ELEKQRMQFA KDLEVQRMQL FMDTQVQLEK IKQAKRSGSS  300
DDIYS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.12e-33Trihelix family protein