PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu042146.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 157aa    MW: 17215.2 Da    PI: 8.9507
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu042146.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000144769123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C++C + F ++  L  H++ H
  Oeu042146.1 47 FSCNYCRRKFYSSQALGGHQNAH 69
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MNYEPSTCLS LGLSKNDHLN LDLVLDPSSP GSSSSSTFSP PEAPRVFSCN YCRRKFYSSQ  60
ALGGHQNAHK LERTLAKKSR EFLTSHAGLS RRAGSGFNKL NNMHGPIPGL DHRGQTGRFN  120
SNIENGRLAE NYGNLNSKFS ECVHEEFSNL DLSLKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.11e-27C2H2 family protein