PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu042246.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 81aa    MW: 8971.69 Da    PI: 10.302
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu042246.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF26.67.9e-0921491745
                 HHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
       SRF-TF 17 rngilKKAeELSvLCdaevaviifsstgk 45
                 r g++KK +E++v+++ae+a+i+ s t k
  Oeu042246.1 21 RVGLFKKPSEICVMTGAEIAIILQSLTRK 49
                 67********************9997654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MVIMEKKTMG RSKIEMKKIE RVGLFKKPSE ICVMTGAEIA IILQSLTRKC VFTFEHSSVD  60
SVIARFKNGI TSDGTVKNYA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-16M-type_MADS family protein