PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu042259.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 576aa    MW: 63728.4 Da    PI: 4.4427
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu042259.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS337.81.9e-1032085743373
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  ++L+ecA+ +s+ d e+a + L +l++ +s++g+p++R+a yf +AL +r++ s +++ +  +       +s+e  + +k+ ++++P+ kf hltaNq
  Oeu042259.1 208 NALVECAQ-LSEIDPENAMKSLIQLRDSVSQHGNPIERVAYYFHQALYSRVSTSAEGTQNVYN------ADSEEFNSLYKVINDACPYSKFVHLTANQ 298
                  78*****9.7788****************************************6666554333......346789999******************** PP

         GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                  aIlea+e++ r+Hi+Df+i qG+QW+aLlqa+a+R+ g+p ++R+ g+ +p  g   +  l +tg+rL +fA+ lg++fef++ v + +e+l+  ++r
  Oeu042259.1 299 AILEATENAIRIHILDFGIVQGVQWAALLQAFATRQTGKPeMIRVSGIPAPILGnsPAALLMATGNRLDEFAKLLGLNFEFEP-VLTPVEELTRATFR 395
                  ************************************666659********99888789999**********************.799*********** PP

         GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
                  v ++E++aVn++lqlh++ldes +  +   ++Lkl ksl+P vv++ e ea++n+++Fl rf +al+yy a+f+sl+ +lpr+s +r  +E  l+gr+
  Oeu042259.1 396 VYSDEVIAVNFMLQLHNFLDESNKNVE---ALLKLAKSLNPCVVTFGEYEASLNRGEFLPRFKKALKYYGAVFESLDPNLPRDSPDRLRMEMLLFGRR 490
                  *******************99988888...******************************************************************** PP

         GRAS 294 ivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee..sgslvlgWkdrpLvsvSaW 373
                  i  +v +e++  +r  +e +e Wr+ +e+aG++p+ ls++  +qa+ ll +++ s  y+v ++   g l l+W+d pL+svS+W
  Oeu042259.1 491 IAGAVGAEESGtKRFSMEDKEFWRSLMENAGLEPLGLSHYSKSQARILLWNCNySVSYKVVDSspPGFLSLYWNDVPLLSVSSW 574
                  *****999887578889************************************9999**99773245666************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    
MAYTCTDTGN LMAIAQQLIN QKQQQDQQQQ QLLSINPFCS TNAGSGNQHN AAAASSMSYG  60
ADGGYCDPFQ VTDETVASER GFQFPNLEQH STGFQYSDLC GGTGGEFDSD EWMESLMGDK  120
DSTERSKFPA DCDAWQTESD FNFYSADPFS IPPSDLNRVI FSEPPEASTW VPLPPQPSTV  180
SNLMVFTGNT GTSTSPPESS PSKNPILNAL VECAQLSEID PENAMKSLIQ LRDSVSQHGN  240
PIERVAYYFH QALYSRVSTS AEGTQNVYNA DSEEFNSLYK VINDACPYSK FVHLTANQAI  300
LEATENAIRI HILDFGIVQG VQWAALLQAF ATRQTGKPEM IRVSGIPAPI LGNSPAALLM  360
ATGNRLDEFA KLLGLNFEFE PVLTPVEELT RATFRVYSDE VIAVNFMLQL HNFLDESNKN  420
VEALLKLAKS LNPCVVTFGE YEASLNRGEF LPRFKKALKY YGAVFESLDP NLPRDSPDRL  480
RMEMLLFGRR IAGAVGAEES GTKRFSMEDK EFWRSLMENA GLEPLGLSHY SKSQARILLW  540
NCNYSVSYKV VDSSPPGFLS LYWNDVPLLS VSSWH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50650.11e-160GRAS family protein