PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu042267.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 225aa    MW: 24777.4 Da    PI: 8.5599
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu042267.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA65.84.5e-21114148135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C+nCgtt+TplWR+gp+g+k+LCnaCG++++k+++
  Oeu042267.1 114 CANCGTTSTPLWRNGPRGPKSLCNACGIRFKKEER 148
                  ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MMQRCNSSCG QCSCGLYHSA NNSFSMIFSS SNSKPFDHDG DMYPASSSVD CTLSLGTPST  60
RLTSENEKKR YSCMSNFGWN ILQSKPPSTA GKNRGGSNSN TCSGGGDPLL ARRCANCGTT  120
STPLWRNGPR GPKSLCNACG IRFKKEERRA TEANNGGANA VNNSSWVHHQ SQHQKMPCFS  180
SSNYANEFRF IEENDLHESE KGIPFLTWRF NVTDRPNFVH DFTR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.17e-49GATA family protein