PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu042401.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 236aa    MW: 26693.7 Da    PI: 10.0303
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu042401.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.29.4e-281059251
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 ri+n++ rqvtfskRr g+lKKA+ELS+LCda+v +iifss+gkly+++s
  Oeu042401.1 10 RIDNSTSRQVTFSKRRSGLLKKAKELSILCDAQVGLIIFSSSGKLYDFAS 59
                 8***********************************************86 PP
2K-box76.56.8e-2681170998
        K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                  + +++ + +++e++ L+++++ Lq++ R+llGe+L+ L + +Lq+Le+qLe slk+iR kK+++l+++ieel +k + +++en +L kk+
  Oeu042401.1  81 NPTSEIKFWKKEAESLRRQLQYLQESYRKLLGEELSGLGIIDLQNLENQLEMSLKSIRMKKEQILKDEIEELNHKGNLMHQENIELYKKV 170
                  4678899*******************************************************************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KAKELSILCD AQVGLIIFSS SGKLYDFAST  60
SMKSLIERYN KAKEEHYQLV NPTSEIKFWK KEAESLRRQL QYLQESYRKL LGEELSGLGI  120
IDLQNLENQL EMSLKSIRMK KEQILKDEIE ELNHKGNLMH QENIELYKKV SLVSQENAGL  180
QVKVYGSGGT NTANRVPHIT RGISHGYDLP IPVNLQLSQP QIEKNDPPAN GIKLG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.11e-83MIKC_MADS family protein