PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu042416.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 223aa    MW: 25285.8 Da    PI: 8.8889
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu042416.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.2e-0980128555
                  HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  h e Er+RR+++ + ++ Lr+llP       ++K    +   +A +YIk++q
  Oeu042416.1  80 HREFERQRRKQMAKLYASLRSLLPLeY---IKGKRAVCDHMNEALNYIKDMQ 128
                  8999*********************77...9*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MFPSQSQDDP IFKDPSIFQE DIVNLEEYLI ADHQDSSVLT RNRSRANPKD TKKRQIKPSS  60
DDEENKEGVS AENKGKNIPH REFERQRRKQ MAKLYASLRS LLPLEYIKGK RAVCDHMNEA  120
LNYIKDMQKN IQELSLCRDK LKKLYTSGSN SNLMPNSVTV SPCQDGVEVL IRTSSIKGGF  180
PLSRVLGELI RTNLNVATAT VLMCTDLSAL RERLFNVINI EN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1139144DKLKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.11e-33bHLH family protein