PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu042464.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family TCP
Protein Properties Length: 444aa    MW: 48110.1 Da    PI: 8.7719
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu042464.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP120.91.5e-37732323137
          TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..ssssasec.eaesssssasnsssg......... 88 
                  g+kdrhsk+ T++g++dRRvRls+++a++f+dLqd+LG+d++sk+ieWLl++a ++i el+    +++ + ++ ++ +++ss++    +         
  Oeu042464.1  73 GGKDRHSKVLTSKGLKDRRVRLSVSTAIQFYDLQDRLGYDQPSKAIEWLLKAAATSISELPPIttTFPEN-NSkQPTEENSSTGGAADHlrfdsaele 169
                  78**********************************************************9985333333.333444555554422222566777788 PP

          TCP  89 .............kaaksaakskksqksaasalnlak.esrakarararertrekmriknkln 137
                                 +ks a+s+ s++s+ s l+l++ e r kar+ra+er  ek + k+k+n
  Oeu042464.1 170 vdgdpnyqqrmttTLSKSPACSSTSETSKGSGLSLSRsENRVKARERAKERVVEKEKEKEKDN 232
                  88888888889866666666999999999999*****9*****************99999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    
MEADEIQARG CKFSRTSNGR LDSDKLELTR KDDEAGEPKR GIGVDLSDVG VDGLRRFYGW  60
SSSRIVRVSR VSGGKDRHSK VLTSKGLKDR RVRLSVSTAI QFYDLQDRLG YDQPSKAIEW  120
LLKAAATSIS ELPPITTTFP ENNSKQPTEE NSSTGGAADH LRFDSAELEV DGDPNYQQRM  180
TTTLSKSPAC SSTSETSKGS GLSLSRSENR VKARERAKER VVEKEKEKEK DNESTRVTHK  240
NPISQTTSFT ELLSAGINNV NGNHHTKTTC GTINYFTSGL LDPAMATRPG QMLTGSPLSP  300
PLTTVSSPLF SLAGDNPELH HFSFLPDHLV QVLPSATGRN ENNNIHNQYT LGFTMSSSSS  360
SGLAGFNRGT LQSNSSTLFP RLQRFSSIDH GSQTFFTGPV AAPVENHHHF LAGFDAGLQL  420
YPGSSGGAHG GSRHSGHETK GKN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.16e-51TCP family protein