PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu042786.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YC
Protein Properties Length: 260aa    MW: 28682.4 Da    PI: 5.0294
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu042786.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC176.62.4e-55811841101
        NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 
                  ql+sfw++q   i+++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlr+w+h+eenkrrtl+k+diaaa+trtdifdflvdi
  Oeu042786.1  81 QLQSFWANQyeeIDQVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDI 178
                  89******9888999*********************************************************************************** PP

        NF-YC  96 vprdel 101
                  vpr++l
  Oeu042786.1 179 VPREDL 184
                  ***987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDQQVNGQPQ GMGVVGSSAQ NPQSVTSYQG NQMTVPSGPA SAGSTQSSQT AGLLTSPAQM  60
AQHQLAYQHI HQQQQQQLQQ QLQSFWANQY EEIDQVTDFK NHSLPLARIK KIMKADEDVR  120
MISAEAPVIF ARACEMFILE LTLRAWNHTE ENKRRTLQKN DIAAAITRTD IFDFLVDIVP  180
REDLKDEVLA SIPRESLPVG GPAEGLPYYY MPPQPPAPPL SAPGMFVGKP VDPALYAQQP  240
HSYMGQQMWP QPPPPPPDS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154160RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.31e-73NF-YC family protein