PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu042954.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 164aa MW: 18688.4 Da PI: 10.4047

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu042954.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.5	4.6e-18	12	66	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +f++eq++ L++ F ++ ++ +++ +LA++lgL+ rqV +WFqN+Ra++k Oeu042954.1 12 KNKIKFSDEQIRSLQTIFDSETKIEPKKKVQLARELGLKPRQVAIWFQNKRARRK 66 56789************************************************99 PP
2	HD-ZIP_I/II	107.9	7.4e-35	13	104	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k ++s+eq+++L + F++e+k+ep++Kv+lareLgl+prqva+WFqn+RAR ktk+lE+dy+ L ++y++l+++ + L+ke+++L +l++ Oeu042954.1 13 NKIKFSDEQIRSLQTIFDSETKIEPKKKVQLARELGLKPRQVAIWFQNKRARRKTKKLERDYSILMANYNNLASRFDVLKKEKQSLLIQLQK 104 689***********************************************************************************999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence
MYTTASSVKK MKNKIKFSDE QIRSLQTIFD SETKIEPKKK VQLARELGLK PRQVAIWFQN 60 KRARRKTKKL ERDYSILMAN YNNLASRFDV LKKEKQSLLI QLQKLKEIEE KAGNSSNGGE 120 STIANGENIK SEVEAAELKP YLSGKHVFSV DENSMRSAAD YLN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	69	KRARRKTKK
2	61	95	KRARRKTKKLERDYSILMANYNNLASRFDVLKKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61890.1	7e-37	HD-ZIP family protein