PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu042999.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MIKC_MADS

Protein Properties

Length: 223aa MW: 25058.5 Da PI: 5.2147

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu042999.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	51.6	1.2e-16	9	42	1	34
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-E CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdae 34 k+i+n + rqvtfskRr g+ KKA+ELS+LCdae Oeu042999.1 9 KKIDNLTARQVTFSKRRRGVCKKAQELSTLCDAE 42 68******************************98 PP
2	K-box	25.7	4.9e-10	126	178	31	83
K-box 31 LqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk 83 re+R+l GedL+ L++ +L++Le+ ++++l+++ ++++ lle+ l+++ Oeu042999.1 126 KTRELRQLSGEDLQGLDMDQLMKLEKIVQRGLNSVVETRESKLLEENAMLKQQ 178 45899*************************************99999888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MVREKIQIKK IDNLTARQVT FSKRRRGVCK KAQELSTLCD AEEAASQGGI QSVIERYEEQ 60 HASPQTDGQN QSSNSRYEPM TELSPRAMRA LLGELTQDVV EQVTLFAFSS QENNSCGMLS 120 KMHEDKTREL RQLSGEDLQG LDMDQLMKLE KIVQRGLNSV VETRESKLLE ENAMLKQQAD 180 APLMVFIKAI RPSVSEILMA MILPSGWAYV SPTEDDARRP QP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24540.1	1e-29	MIKC_MADS family protein