PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu043001.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 71aa    MW: 7780.3 Da    PI: 10.79
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu043001.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF421.2e-131851842
                 HHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
       SRF-TF  8 nrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                 + qvt+ kRr g++KK +E S+LCdae+a+iifs 
  Oeu043001.1 18 QLQVTLLKRR-GVFKKTQEPSTLCDAEIALIIFSA 51
                 458*****98.9*********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    
MARKKIQIKK IDNLTAHQLQ VTLLKRRGVF KKTQEPSTLC DAEIALIIFS ALEKSSIVLA  60
QGFLISSPLS *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24540.14e-17MIKC_MADS family protein