PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu043065.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 278aa MW: 31416.6 Da PI: 4.3029

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu043065.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62	9e-20	64	117	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t eq++ Le+ Fe ++++ +++++LAkklgL+ rqV vWFqNrRa++k Oeu043065.1 64 KKRRLTLEQVHLLEKSFETENKLEPDRKTQLAKKLGLQPRQVAVWFQNRRARWK 117 56689************************************************9 PP
2	HD-ZIP_I/II	132.9	1.2e-42	63	153	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqv+lLE+sFe+e+kLep+rK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd+l+++ +++ ke+e+L++e+ Oeu043065.1 63 EKKRRLTLEQVHLLEKSFETENKLEPDRKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDKLKSSYDSLSSSYDSILKENEKLKAEV 153 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MESGRIFFDP SYNGNVVFLR NGDSVYREAR LAMNMEETSK RRPFFSSPEE LYDEEYYDEQ 60 LPEKKRRLTL EQVHLLEKSF ETENKLEPDR KTQLAKKLGL QPRQVAVWFQ NRRARWKTKQ 120 LERDYDKLKS SYDSLSSSYD SILKENEKLK AEVFSLTEKL QGKEAAVEKS DPVLVDAPAD 180 SPAQLILNVE DRLSSGSDGS SAVDDQEGPQ LVDSGDSYFP NNYLGCVAAG VGGIQSEEDD 240 GSDDGGSYLS NMLVVAEKQE EEEGELLGWH IWSTLDN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	120	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	3e-67	HD-ZIP family protein