PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu043094.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 299aa MW: 33565.2 Da PI: 6.2847

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu043094.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	106.9	3.1e-33	33	129	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.........k 89 +g+kdrhsk++Tk+g++dRRvRls ++a++f+d+qd+LG+d++sk+++WL+++ak ai++l ++++++a +++++++ ++++ ++ + Oeu043094.1 33 TGRKDRHSKVCTKRGPKDRRVRLSPNTAIQFYDVQDRLGYDRPSKALDWLMEEAKSAIDALDQSDNNAAIIMQSDDHRAGEGFQDHSqrdtfchqmQ 129 89**************************************************************888885553333332222222221222332220 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MQEDFHQASS KLKLKIRKRE VKDVHGGRIV RPTGRKDRHS KVCTKRGPKD RRVRLSPNTA 60 IQFYDVQDRL GYDRPSKALD WLMEEAKSAI DALDQSDNNA AIIMQSDDHR AGEGFQDHSQ 120 RDTFCHQMQP DGSFSTSESG IQCQEVWKDN PIYHNNLKSK TQGQSLHCSS QYLPDDSIII 180 SGYEQGLFSM STPSHLDTDS EMAAIQKLFT WNHDNGQKNQ FSSQREPLQS SECPPMNYGL 240 SNTQFSSIGL SGQEISEITT APIEVGEMES NSIFMKAKPS CGTPFSHFED FLANSPLP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	3e-35	TCP family protein