PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu043175.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 210aa MW: 23257.7 Da PI: 6.4957

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu043175.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	69.8	5.6e-22	6	53	1	48
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllka 48 +Ca+Ck+lrr+Ca+dCv+apyfp+++p+kfa+vhk+FGasn++k+l+ Oeu043175.1 6 PCASCKLLRRRCAQDCVFAPYFPSDDPHKFAIVHKVFGASNISKMLQV 53 7********************************************986 PP
2	DUF260	59.6	8.9e-19	89	144	45	100
DUF260 45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +k+lp ++r da+sslvyeA+arardPvyG+vgvi+ lq+q++ql+ ela++++e Oeu043175.1 89 NVKELPLHQRVDAVSSLVYEANARARDPVYGCVGVISYLQNQVSQLQMELAVAQAE 144 57899**********************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MGGNPPCASC KLLRRRCAQD CVFAPYFPSD DPHKFAIVHK VFGASNISKM LQVVAVVGGW 60 VGLIFGLRST YVYLSWALDA ARIEFISWNV KELPLHQRVD AVSSLVYEAN ARARDPVYGC 120 VGVISYLQNQ VSQLQMELAV AQAETLCIQM QQEPAPIATN PIMLEAQDDK SSFFLHQNNL 180 PQFLSFSSSN NVIFDSFKKE SIFGQDMIS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	2e-65	LBD family protein