PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu043227.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 607aa MW: 68513.5 Da PI: 8.3984

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu043227.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.1	8e-24	94	194	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvlt sd +++g +++ +++a+e+ + + s++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv++++L +gD +vF + +++e Oeu043227.1 94 FCKVLTASDRSTHGGFSILRRHANEClppldmtQAI--PSQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFL--RGDNGE 187 99*************************9965444..4569********************************************..348999 PP .EEEEE- CS B3 92 lvvkvfr 98 l+v+v+r Oeu043227.1 188 LRVGVRR 194 9**98 PP
2	Auxin_resp	95.9	6e-32	220	299	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++tk+ F v+Y+Pra s+F++ ++ +++a+k+k+ vGmRfkm+f +e+s+err +Gtv+gv d ++++W++SkWrsLk Oeu043227.1 220 ASHAITTKTLFVVYYKPRA--SQFIIGLNTYLEAIKHKFYVGMRFKMRFKEEESPERRSTGTVIGVGD-SSTHWTDSKWRSLK 299 789*************8..9******************************************.666*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MVDVPCSGER VYYFPQGHLE QLEASTNQEL NKQIPRFNLP SKILCRVFNI QLRAEPETDE 60 VYAQITLHPE PDQTEPTSPD PCPPDPPKQN VRSFCKVLTA SDRSTHGGFS ILRRHANECL 120 PPLDMTQAIP SQDLVAKDLH GYEWRFKHIF RGQPRRHLLT TGWSTFVSSK RLVAGDAFVF 180 LRGDNGELRV GVRRLARQQS PVPTSVISSE SMHLGVLASA SHAITTKTLF VVYYKPRASQ 240 FIIGLNTYLE AIKHKFYVGM RFKMRFKEEE SPERRSTGTV IGVGDSSTHW TDSKWRSLKI 300 QWDEPATEHW SERVSSWEIE PFVASASVDI TQPATKNKRP RLLDLHPSGT TTGTLSSGMR 360 PPTSVGNTSP NLFQESEYNK NVSVRSILTN YNSPVSARTS KDHFLDQVDS SKKFETTSAC 420 RLFGIDLRNN ANNIPPVEKE VLVPNITSKC ANDVDRIHNR DTLISSEERK HVVEVFPNEN 480 QRKLSSASST RTRTKVQMQG ISIGRAVDLS AFEGYDDLIS ELEKIFEIKG ELRPRNKWGI 540 VYTDNEGDVM LVGDDPWPEF CKIVKKICIY SIGEVKKMNP RCKFPLSSFN SEGTTRNLDL 600 EPKSAE*

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MVDVPCSGER VYYFPQGHLE QLEASTNQEL NKQIPRFNLP SKILCRVFNI QLRAEPETDE  60
VYAQITLHPE PDQTEPTSPD PCPPDPPKQN VRSFCKVLTA SDRSTHGGFS ILRRHANECL  120
PPLDMTQAIP SQDLVAKDLH GYEWRFKHIF RGQPRRHLLT TGWSTFVSSK RLVAGDAFVF  180
LRGDNGELRV GVRRLARQQS PVPTSVISSE SMHLGVLASA SHAITTKTLF VVYYKPRASQ  240
FIIGLNTYLE AIKHKFYVGM RFKMRFKEEE SPERRSTGTV IGVGDSSTHW TDSKWRSLKI  300
QWDEPATEHW SERVSSWEIE PFVASASVDI TQPATKNKRP RLLDLHPSGT TTGTLSSGMR  360
PPTSVGNTSP NLFQESEYNK NVSVRSILTN YNSPVSARTS KDHFLDQVDS SKKFETTSAC  420
RLFGIDLRNN ANNIPPVEKE VLVPNITSKC ANDVDRIHNR DTLISSEERK HVVEVFPNEN  480
QRKLSSASST RTRTKVQMQG ISIGRAVDLS AFEGYDDLIS ELEKIFEIKG ELRPRNKWGI  540
VYTDNEGDVM LVGDDPWPEF CKIVKKICIY SIGEVKKMNP RCKFPLSSFN SEGTTRNLDL  600
EPKSAE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61830.1	0.0	ARF family protein